Particle Based Domain Decomposition

14.01.02


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Content

Author: Matthias Müller

  1. Particle Based Domain Decomposition
  2.     Particle Methods
  3.     Differences to Grid based algorithms
  4.     General questions of the physical approach
  5.     Case study: short range Molecular Dynamics
  6.     Approach 1: Particle Decomposition
  7.     Approach 1: Particle Decomposition
  8.     Approach 2: Force Decomposition
  9.     Advantages and Disadvantages of Approach 2
  10.     Approach 3: Domain Decomposition
  11.     Approach 3: Domain Decomposition
  12.     Advantages and Disadvantages of Approach 3
  13.     Comparison of Different Approaches
  14.     Molecular Dynamics with Verlet Neighbor Lists
  15.     Molecular Dynamics with Linked Cell Algorithm
  16.     Parallel Molecular Dynamics
  17.     Details of Communication: General Pattern
  18.     Details of Communication: actio=reactio across CPUs
  19.     Details of Communication: Problem of buffer space
  20.     Load Balancing
  21.     Simple Load Balancing
  22.     Summary

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