Particle Based Domain Decomposition

Content

1. Particle Based Domain Decomposition
2.     Particle Methods
3.     Differences to Grid based algorithms
4.     General questions of the physical approach
5.     Case study: short range Molecular Dynamics
6.     Approach 1: Particle Decomposition
7.     Approach 1: Particle Decomposition
8.     Approach 2: Force Decomposition
9.     Advantages and Disadvantages of Approach 2
10.     Approach 3: Domain Decomposition
11.     Approach 3: Domain Decomposition
12.     Advantages and Disadvantages of Approach 3
13.     Comparison of Different Approaches
14.     Molecular Dynamics with Verlet Neighbor Lists
15.     Molecular Dynamics with Linked Cell Algorithm
16.     Parallel Molecular Dynamics
17.     Details of Communication: General Pattern
18.     Details of Communication: actio=reactio across CPUs
19.     Details of Communication: Problem of buffer space
20.     Load Balancing
21.     Simple Load Balancing
22.     Summary